Package: corMLPE 0.1.0

corMLPE: Correlation Structures for Symmetric Relational Data

Implements correlation structures for symmetric relational data (e.g. pairwise distances and dissimilarities) that interface with models using 'nlme'-style correlation structures. The maximum likelihood population effects method is described by Clarke et al. (2002) <doi:10.1198/108571102320>.

Authors:Nathaniel Pope [aut], Bill Peterman [aut, cre]

corMLPE_0.1.0.tar.gz
corMLPE_0.1.0.zip(r-4.7)corMLPE_0.1.0.zip(r-4.6)corMLPE_0.1.0.zip(r-4.5)
corMLPE_0.1.0.tgz(r-4.6-x86_64)corMLPE_0.1.0.tgz(r-4.6-arm64)corMLPE_0.1.0.tgz(r-4.5-x86_64)corMLPE_0.1.0.tgz(r-4.5-arm64)
corMLPE_0.1.0.tar.gz(r-4.7-arm64)corMLPE_0.1.0.tar.gz(r-4.7-x86_64)corMLPE_0.1.0.tar.gz(r-4.6-arm64)corMLPE_0.1.0.tar.gz(r-4.6-x86_64)
corMLPE_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
corMLPE/json (API)

# Install 'corMLPE' in R:
install.packages('corMLPE', repos = c('https://wpeterman.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/wpeterman/cormlpe/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

Conda:

openblascppopenmp

3.60 score 4 stars 7 exports 6 dependencies

Last updated from:6cef429778. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK141
linux-devel-x86_64OK148
source / vignettesOK169
linux-release-arm64OK139
linux-release-x86_64OK155
macos-release-arm64OK145
macos-release-x86_64OK209
macos-oldrel-arm64OK88
macos-oldrel-x86_64OK314
windows-develOK132
windows-releaseOK131
windows-oldrelOK208
wasm-releaseOK114

Exports:corMaternMLPEcorMLPEcorNMLPEcorNMLPE2simulate_corMLPE_residualssimulate_IBD_corMLPEt

Dependencies:latticeMASSMatrixnlmeRcppRcppArmadillo

Readme and manuals

Help Manual

Help pageTopics
Correlation Structure for Grouped Matern MLPE Modelsas.matrix.corMaternMLPE corMaternMLPE
Correlation structure for symmetric relational dataas.matrix.corMLPE corMLPE
Correlation Structure for Clustered NMLPE Modelsas.matrix.corNMLPE corNMLPE
Correlation Structure for Reduced-Basis NMLPE Modelsas.matrix.corNMLPE2 corNMLPE2
Methods for Internal `dgCMatrix_corMLPE` ObjectsdgCMatrix_corMLPE-methods t,dgCMatrix_corMLPE-method [,dgCMatrix_corMLPE,index,missing,logical-method [,dgCMatrix_corMLPE,missing,index,logical-method
Simulate data from a fitted corMLPE modelsimulate_corMLPE_residuals
Simulate data from an isolation-by-distance model with MLPE correlation structuresimulate_IBD_corMLPE